From 94f02a14e89c9e2681546c49f2e9ee4b1f5e8035 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Tue, 25 Aug 2020 18:55:54 -0500
Subject: [PATCH] Fix CI lint
---
.gitlab-ci.yml | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index b0304cd..3c76ede 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -190,7 +190,7 @@ override_fastq:
stage: integration
script:
- hostname
- - ulimit -a
+ - ulimit -a
- nextflow -q run ./workflow/rna-seq.nf --deriva ./test_data/auth/credential.json --bdbag ./test_data/auth/cookies.txt --repRID Q-Y5JA --fastqForce 'test_data/fastq/small/Q-Y5F6_1M.R{1,2}.fastq.gz' --ci true
- find . -type f -name "multiqc_data.json" -exec cp {} ./fastqOverride_PE_multiqc_data.json \;
artifacts:
--
GitLab