From 92edc38fd8246ff63380458fd8e14b3ea5203bb7 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Tue, 14 Jul 2020 17:05:33 -0500
Subject: [PATCH] Add runtime info
---
workflow/rna-seq.nf | 21 +++++++++++++++++++++
1 file changed, 21 insertions(+)
diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf
index 143b342..b767ee9 100644
--- a/workflow/rna-seq.nf
+++ b/workflow/rna-seq.nf
@@ -82,6 +82,27 @@ process trackStart {
"""
}
+log.info """\
+====================================
+BICF RNA-seq Pipeline for GUDMAP/RBK
+====================================
+Replicate RID : ${params.repRID}
+Source Server: ${params.source}
+Mouse Reference Version: ${params.refMoVersion}
+Human Reference Version: ${params.refhuVersion}
+ERCC Reference Version: ${params.refERCCVersion}
+Output Directory: ${params.outDir}
+------------------------------------
+Nextflow Version: ${workflow.nextflow.version}
+Pipeline Version: ${pipelineVersion}
+Session ID : ${workflow.sessionId}
+------------------------------------
+Astrocyte : ${params.astrocyte}
+CI : ${params.ci}
+Development : ${params.dev}
+------------------------------------
+"""
+
/*
* splitData: split bdbag files by replicate so fetch can occure in parallel, and rename files to replicate rid
*/
--
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