From 9125e3b3917bdd22e0401613b56f5ef9bcdc492c Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Wed, 6 Jan 2021 20:38:51 -0600
Subject: [PATCH] Fix species error variable
---
workflow/rna-seq.nf | 8 ++++----
1 file changed, 4 insertions(+), 4 deletions(-)
diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf
index 95239b0..3a402fc 100644
--- a/workflow/rna-seq.nf
+++ b/workflow/rna-seq.nf
@@ -937,11 +937,11 @@ speciesInfer.into {
}
// Split species count error into separate channel
-speciesCountError = Channel.create()
-speciesCountError_details = Channel.create()
+speciesError = Channel.create()
+speciesError_details = Channel.create()
speciesError_fl.splitCsv(sep: ",", header: false).separate(
- speciesCountError,
- speciesCountError_details
+ speciesError,
+ speciesError_details
)
// Replicate errors for multiple process inputs
--
GitLab