diff --git a/workflow/conf/multiqc_config.yaml b/workflow/conf/multiqc_config.yaml index 5e3933562e3f05e769c36e1ce1e7c16a57ea50be..db6a335a8e5e6f8677dd8c433d391c6fd5224751 100644 --- a/workflow/conf/multiqc_config.yaml +++ b/workflow/conf/multiqc_config.yaml @@ -74,6 +74,7 @@ custom_data: plot_type: 'table' pconfig: id: 'meta' + format: '{:,.0f}' headers: Source Species diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf index 7dd69e5f5fee5ee2bc89572b527d230e6cd1e450..efeb0f12ab54021fa9bd8dd480f1a0c9c2f8ff3d 100644 --- a/workflow/rna-seq.nf +++ b/workflow/rna-seq.nf @@ -239,7 +239,7 @@ process parseMetadata { # get read length metadata readLength=\$(python3 ${script_parseMeta} -r ${repRID} -m "${experimentSettings}" -p readLength) - if [ "\${readLength}" == "nan"] + if [ "\${readLength}" = "nan"] then readLength="NA" fi