From 8d80de505cf349cecbaa3a5dff4d7e8d197e87e0 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Thu, 6 May 2021 23:35:00 -0500
Subject: [PATCH] Add new process to configs
---
nextflowConf/aws.config | 4 ++++
nextflowConf/biohpc.config | 3 +++
nextflowConf/dnanexus.config | 5 +++++
3 files changed, 12 insertions(+)
diff --git a/nextflowConf/aws.config b/nextflowConf/aws.config
index a5133aa..1b1f81c 100644
--- a/nextflowConf/aws.config
+++ b/nextflowConf/aws.config
@@ -111,6 +111,10 @@ process {
cpus = 1
memory = '1 GB'
}
+ withName:failPreExecutionRun_seqwho {
+ cpus = 1
+ memory = '1 GB'
+ }
withName:failExecutionRun {
cpus = 1
memory = '1 GB'
diff --git a/nextflowConf/biohpc.config b/nextflowConf/biohpc.config
index dff28cb..a628aa4 100755
--- a/nextflowConf/biohpc.config
+++ b/nextflowConf/biohpc.config
@@ -91,6 +91,9 @@ process {
withName:failPreExecutionRun {
executor = 'local'
}
+ withName:failPreExecutionRun_seqwho {
+ executor = 'local'
+ }
withName:failExecutionRun {
executor = 'local'
}
diff --git a/nextflowConf/dnanexus.config b/nextflowConf/dnanexus.config
index d7c1029..b493b32 100755
--- a/nextflowConf/dnanexus.config
+++ b/nextflowConf/dnanexus.config
@@ -138,6 +138,11 @@ process {
cpus = 1
memory = '1 GB'
}
+ withName:failPreExecutionRun_seqwho {
+ executor = 'dnanexus'
+ cpus = 1
+ memory = '1 GB'
+ }
withName:failExecutionRun {
executor = 'dnanexus'
cpus = 1
--
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