diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf index 8f02fb983adc1d979a1c643afe6148038b51c29d..70043b72140b62295e9bc48ed242f011785d9bfb 100644 --- a/workflow/rna-seq.nf +++ b/workflow/rna-seq.nf @@ -2014,7 +2014,7 @@ process failExecutionRun { then pipelineError_details=\$(echo \${pipelineError_details}"|Species|${speciesMeta}|${speciesInfer}|\\n") fi - pipelineError_details=\${pipelineError_details::-2} + #pipelineError_details=\${pipelineError_details::-2} rid=\$(python3 ${script_uploadExecutionRun_failExecutionRun} -r ${repRID} -w \${workflow} -g \${genome} -i ${inputBagRID} -s Error -d "\${pipelineError_details}" -o ${source} -c \${cookie} -u ${executionRunRID}) echo LOG: execution run RID marked as error - \${rid} >> ${repRID}.finalizeExecutionRun.log fi