diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf index 716e532564e60ef8d62e56905af754ba9d7476c5..f59b4891b9dbeb9ec619237fe9068f9861dbc34f 100644 --- a/workflow/rna-seq.nf +++ b/workflow/rna-seq.nf @@ -56,17 +56,19 @@ process trackStart { ulimit -a export https_proxy=\${http_proxy} - curl -H 'Content-Type: application/json' -X PUT -d '{ \ + curl -H 'Content-Type: application/json' -X PUT -d + '{ \ "sessionId": "${workflow.sessionId}", \ "pipeline": "gudmap.rbk_rnaseq", \ "start": "${workflow.start}", \ - "repRID": ${reRID} \ + "repRID": ${reRID}, \ "astrocyte": false, \ "status": "started", \ "nextflowVersion": "${workflow.nextflow.version}", \ "ci": ${params.ci}, \ - "dev": ${params.dev}}' \ - "https://xku43pcwnf.execute-api.us-east-1.amazonaws.com/ProdDeploy/pipeline-tracking" + "dev": ${params.dev} \ + }' \ + "https://xku43pcwnf.execute-api.us-east-1.amazonaws.com/ProdDeploy/pipeline-tracking" """ }