diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf index 69c3a2d39fd4dff4d1be9362c65683f44799c833..d1d745c0cede36c924b1a4d6cb08404da6d6de20 100644 --- a/workflow/rna-seq.nf +++ b/workflow/rna-seq.nf @@ -1976,7 +1976,7 @@ process aggrQC { ulimit -a >> ${repRID}.aggrQC.log # make run table - if [ "${params.inputBagForce}" == "" ] && [ "${params.fastqsForce}" == "" ] && [ "${params.speciesForce}" == "" && [ "${params.strandedForce}" == "" && [ "${params.spikeForce}" == "" ] + if [ "${params.inputBagForce}" == "" ] && [ "${params.fastqsForce}" == "" ] && [ "${params.speciesForce}" == "" ] && [ "${params.strandedForce}" == "" ] && [ "${params.spikeForce}" == "" ] then input="default" else