diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index 0ae31f4dc3710e954e9d4bccafed4ae3561f8067..fc5005e184869f680bbd484de55ce76cb5a24268 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -86,11 +86,13 @@ fastqc: integration_se: stage: integration script: + - ulimit -u 16384 - nextflow run ./workflow/rna-seq.nf --deriva ./test_data/auth/credential.json --bdbag ./test_data/auth/cookies.txt --repRID 16-1ZX4 integration_pe: stage: integration script: + - ulimit -u 16384 - nextflow run ./workflow/rna-seq.nf --deriva ./test_data/auth/credential.json --bdbag ./test_data/auth/cookies.txt --repRID Q-Y5JA -with-dag dag.png artifacts: name: "$CI_JOB_NAME"