diff --git a/docs/software_versions_mqc.yaml b/docs/software_versions_mqc.yaml
index 6da4575b45ec21bba33b6db830c0a606145e61bd..7b44cf8c8b898ceb03770670a6acd4d7396a2550 100644
--- a/docs/software_versions_mqc.yaml
+++ b/docs/software_versions_mqc.yaml
@@ -1,5 +1,5 @@
 
-        id: 'Software Versions'
+        id: 'software_versions'
         section_name: 'Software Versions'
         section_href: 'https://git.biohpc.swmed.edu/gudmap_rbk/rna-seq/-/blob/78-tool_version/docs/RNA-Seq%20Pipeline%20Design%20Process%20Table.pdf'
         plot_type: 'html'
diff --git a/workflow/conf/multiqc_config.yaml b/workflow/conf/multiqc_config.yaml
index 8a357e3f651aebde2b438341a4cdf4a1822a0832..8a91a75b919a858cdb43c27d0349290bef04b967 100644
--- a/workflow/conf/multiqc_config.yaml
+++ b/workflow/conf/multiqc_config.yaml
@@ -56,10 +56,10 @@ report_section_order:
       order: 2000
     ref:
       order: 1000
-    Software_Versions:
+    software_versions:
       order: -1000
-    Software_References:
-      order: -1100
+    software_references:
+      order: -2000
 
 skip_generalstats: true
 
@@ -157,7 +157,3 @@ sp:
         fn: 'reference.tsv'
     tin:
         fn: '*.tin.hist.tsv'
-    Software_Versions:
-        fn: 'software_versions_mqc.yaml'
-    Software_References:
-        fn: 'software_references_mqc.yaml'