From 85bd9077b18af875e10d55c1e7355d671c7a131a Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Fri, 14 Feb 2020 11:41:01 -0600
Subject: [PATCH] Fix ci lint

---
 .gitlab-ci.yml | 4 +---
 1 file changed, 1 insertion(+), 3 deletions(-)

diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 94c45b3..9043d72 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -5,7 +5,7 @@ before_script:
   - module load nextflow/19.09.0
   - ln -sfn /project/BICF/BICF_Core/shared/gudmap/test_data/* ./test_data/
   - mkdir -p ~/.deriva
-  - mkdir -p ~/.bdbag
+  - mkdir -p ~/.bdbatestg
 
 stages:
   - unit
@@ -38,8 +38,6 @@ parseMetadata:
 getRef:
   stage: unit
   script:
-  - #singularity run 'docker://bicf/awscli:1.1' aws s3 ls s3://bicf-references/mouse/0.0.1/GRCm38.P6
-  - #singularity run 'docker://bicf/awscli:1.1' aws s3 ls s3://bicf-references/human/0.0.1/GRCh38.p12
   - mkdir -p hu
   - mkdir -p mo
   - cp -R /project/BICF/BICF_Core/shared/gudmap/references/GRCh38.p12.v31/hisat2 ./hu/
-- 
GitLab