diff --git a/workflow/conf/aws_ondemand.config b/workflow/conf/aws_ondemand.config index ca23b6c49cd80b98c3120010609d46e7131757f8..0c8b6ff0fd242cda9ca2fb43473e82f99547efef 100755 --- a/workflow/conf/aws_ondemand.config +++ b/workflow/conf/aws_ondemand.config @@ -11,7 +11,7 @@ process { executor = 'awsbatch' queue = 'highpriority-3278a8b0-1fc8-11ea-b1ac-021e2396e2cc' cpus = 1 - memory = '1 GB' + memory = '2 GB' withName:parseMetadata { cpus = 5 @@ -25,10 +25,13 @@ process { } withName:alignData { cpus = 50 - memory = '10 GB' + memory = '5 GB' } withName:dedupData { cpus = 2 memory = '20 GB' } + withName:fastqc { + memory = '5 GB' + } } \ No newline at end of file diff --git a/workflow/conf/aws_spot.config b/workflow/conf/aws_spot.config index e0447565495e09c3ccde2968eb887aa14f7db251..4708298a63ced25cd74edf2646fc3c67a0a7753c 100755 --- a/workflow/conf/aws_spot.config +++ b/workflow/conf/aws_spot.config @@ -11,7 +11,7 @@ process { executor = 'awsbatch' queue = 'default-3278a8b0-1fc8-11ea-b1ac-021e2396e2cc' cpus = 1 - memory = '1 GB' + memory = '2 GB' withName:parseMetadata { cpus = 5 @@ -25,10 +25,13 @@ process { } withName:alignData { cpus = 50 - memory = '10 GB' + memory = '5 GB' } withName:dedupData { cpus = 2 memory = '20 GB' } + withName:fastq { + memory = '5 GB' + } }