From 83a28a40f5e97629e780bc6900b65ac8b91bb645 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Mon, 4 Jan 2021 19:02:49 -0600
Subject: [PATCH] Add double excape to new line in fail
---
workflow/rna-seq.nf | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf
index a262cdd..e9c540d 100644
--- a/workflow/rna-seq.nf
+++ b/workflow/rna-seq.nf
@@ -1979,8 +1979,8 @@ process failExecutionRun {
elif [ ${pipelineError} == true ]
then
pipelineError_details=\$(echo "**Submitted metadata does not match infered:** ")
- #pipelineError_details=\$(echo "**Submitted metadata does not match infered:**\n ")
- #pipelineError_details=\$(echo "|Metadata|Submitted value|Inferred value|\n ")
+ #pipelineError_details=\$(echo "**Submitted metadata does not match infered:**\\n ")
+ #pipelineError_details=\$(echo "|Metadata|Submitted value|Inferred value|\\n ")
#pipelineError_details=\$(echo "|:-:|-:|-:|\n")
if ${pipelineError_ends}
then
--
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