From 805ad15ff7e6e54749d12c86a7b7047079f71c59 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Tue, 14 Jan 2020 16:39:11 -0600
Subject: [PATCH] Update gudmapfilexfer images to 1.3 in configs
---
workflow/conf/aws_ondemand.config | 4 ++--
workflow/conf/aws_spot.config | 4 ++--
workflow/conf/biohpc.config | 4 ++--
3 files changed, 6 insertions(+), 6 deletions(-)
diff --git a/workflow/conf/aws_ondemand.config b/workflow/conf/aws_ondemand.config
index 4c27b6b..1a14ebf 100755
--- a/workflow/conf/aws_ondemand.config
+++ b/workflow/conf/aws_ondemand.config
@@ -14,10 +14,10 @@ process {
memory = '1 GB'
withName:getBag {
- container = 'bicf/gudmaprbkfilexfer:1.1'
+ container = 'bicf/gudmaprbkfilexfer:1.3'
}
withName:getData {
- container = 'bicf/gudmaprbkfilexfer:1.1'
+ container = 'bicf/gudmaprbkfilexfer:1.3'
}
withName:trimData {
container = 'bicf/trimgalore:1.1'
diff --git a/workflow/conf/aws_spot.config b/workflow/conf/aws_spot.config
index 33b2561..b5239a2 100755
--- a/workflow/conf/aws_spot.config
+++ b/workflow/conf/aws_spot.config
@@ -14,10 +14,10 @@ process {
memory = '1 GB'
withName:getBag {
- container = 'bicf/gudmaprbkfilexfer:1.1'
+ container = 'bicf/gudmaprbkfilexfer:1.3'
}
withName:getData {
- container = 'bicf/gudmaprbkfilexfer:1.1'
+ container = 'bicf/gudmaprbkfilexfer:1.3'
}
withName:trimData {
container = 'bicf/trimgalore:1.1'
diff --git a/workflow/conf/biohpc.config b/workflow/conf/biohpc.config
index 2990fe6..02a3358 100755
--- a/workflow/conf/biohpc.config
+++ b/workflow/conf/biohpc.config
@@ -5,11 +5,11 @@ process {
withName:getBag {
executor = 'local'
- container = 'docker://bicf/gudmaprbkfilexfer:1.1'
+ container = 'docker://bicf/gudmaprbkfilexfer:1.3'
}
withName:getData {
executor = 'local'
- container = 'docker://bicf/gudmaprbkfilexfer:1.1'
+ container = 'docker://bicf/gudmaprbkfilexfer:1.3'
}
withName:trimData {
container = 'docker://bicf/trimgalore:1.1'
--
GitLab