diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index c35c463165967f2d1d1edd04cc1d4cf76c9be5f5..722e9c0fb48bfe61fb7781d7c4752a73b873e689 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -1096,9 +1096,10 @@ aws: - mkdir -p ./badges/env - curl --request GET https://img.shields.io/badge/Envronment%3A%20AWS-inactive-critical?style=flat > ./badges/env/aws.svg - module load awscli/1.11.139 - - export AWS_ACCESS_KEY_ID=${aws_accesskeyid} - - export AWS_SECRET_ACCESS_KEY=${aws_secretaccesskey} - - aws configure set region ${aws_region} + - > + export AWS_ACCESS_KEY_ID=${aws_accesskeyid} &&\ + export AWS_SECRET_ACCESS_KEY=${aws_secretaccesskey} &&\ + aws configure set region ${aws_region} - aws s3 cp ./test_data/auth/ s3://bicf-output/ci-env/auth/ --exclude "*" --include "c*" --recursive - aws s3 cp ./test_data/fastq/xsmall/ s3://bicf-output/ci-env/input/ --exclude "*" --include "Q-Y5F6_10K.R*.fastq.gz" --recursive - >