From 79adbc3a22dc34375202f539026574f4d59c9700 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Tue, 2 Mar 2021 15:48:58 -0600
Subject: [PATCH] Fix multiqc
---
workflow/conf/multiqc_config.yaml | 12 ++++++------
1 file changed, 6 insertions(+), 6 deletions(-)
diff --git a/workflow/conf/multiqc_config.yaml b/workflow/conf/multiqc_config.yaml
index 0e6d8d5..89059e0 100644
--- a/workflow/conf/multiqc_config.yaml
+++ b/workflow/conf/multiqc_config.yaml
@@ -27,20 +27,20 @@ top_modules:
- picard:
name: 'Dedup'
info: 'Replicate Alignement Deduplication QC Results'
+ - featureCounts:
+ name: 'Count'
+ info: 'Replicate Feature Count QC Results'
- rseqc:
name: 'Inner Distance'
info: 'Replicate Paired End Inner Distance Distribution Results'
path_filters:
- '*insertSize*'
- custom_content
- - featureCounts:
- name: 'Count'
- info: 'Replicate Feature Count QC Results'
- hisat2:
name: 'Inference: Spike-in'
info: 'Inference Alignment (1M downsampled reads) QC Results'
path_filters:
- - 'ERCC.alignSampleSummary*'
+ - '*alignSampleSummary*'
- rseqc:
name: 'Inference: Stranded'
info: '1M Downsampled Reads Strandedness Inference Results'
@@ -131,8 +131,8 @@ custom_data:
ref:
file_format: 'tsv'
- section_name: 'Reference'
- description: 'This is the reference version information'
+ section_name: 'Genome Reference'
+ description: 'This is the genome reference version information'
plot_type: 'table'
pconfig:
id: 'ref'
--
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