From 715927557b8d5d24a4fa4b4455a6d7957b0697c7 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Tue, 12 Jan 2021 08:34:43 -0600
Subject: [PATCH] Fix complete/fail date tracking passing
---
workflow/rna-seq.nf | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf
index 0990fdc..dcfc718 100644
--- a/workflow/rna-seq.nf
+++ b/workflow/rna-seq.nf
@@ -2159,7 +2159,7 @@ process finalizeExecutionRun {
curl -H 'Content-Type: application/json' -X PUT -d \
'{ \
"ID": "${workflow.sessionId}", \
- "Complete": "\${dt}" \
+ "Complete": "'\${dt}'" \
}' \
"https://9ouc12dkwb.execute-api.us-east-2.amazonaws.com/prod/db/track"
"""
@@ -2249,7 +2249,7 @@ process failPreExecutionRun {
curl -H 'Content-Type: application/json' -X PUT -d \
'{ \
"ID": "${workflow.sessionId}", \
- "Failure": "\${dt}" \
+ "Failure": "'\${dt}'" \
}' \
"https://9ouc12dkwb.execute-api.us-east-2.amazonaws.com/prod/db/track"
"""
@@ -2340,7 +2340,7 @@ process failExecutionRun {
curl -H 'Content-Type: application/json' -X PUT -d \
'{ \
"ID": "${workflow.sessionId}", \
- "Failure": "\${dt}" \
+ "Failure": "'\${dt}'" \
}' \
"https://9ouc12dkwb.execute-api.us-east-2.amazonaws.com/prod/db/track"
"""
--
GitLab