From 6c00f35bcc791eeb105250373d82a0646c511e8d Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Mon, 28 Dec 2020 18:59:49 -0600
Subject: [PATCH] Fix trim ci unit PE file output test
---
workflow/tests/test_trimData.py | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/workflow/tests/test_trimData.py b/workflow/tests/test_trimData.py
index 40dd2dc..a0938e7 100644
--- a/workflow/tests/test_trimData.py
+++ b/workflow/tests/test_trimData.py
@@ -18,6 +18,6 @@ def test_trimData_se():
@pytest.mark.trimData
def test_trimData_pe():
assert os.path.exists(os.path.join(
- test_output_path, 'Q-Y5F6_1M.pe_R1_val_1.fq.gz'))
+ test_output_path, 'Q-Y5F6_1M.pe_val_1.fq.gz'))
assert os.path.exists(os.path.join(
- test_output_path, 'Q-Y5F6_1M.pe_R2_val_2.fq.gz'))
+ test_output_path, 'Q-Y5F6_1M.pe_val_2.fq.gz'))
--
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