diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index 1d953286f790ec9d0096c541ddbfa1301f94212b..5dc43603a40dd59ce926bf9a69f2655b7069f99e 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -1039,7 +1039,12 @@ dnanexus: jobID=$(cat dx.log | grep -oP "Job ID: \K.*") - dx watch ${jobID} --auth-token ${dnanexus_authToken} --project-context-id ${dnanexus_workspace} - status=$(dx find executions --id ${jobID} --state failed --brief --auth-token ${dnanexus_authToken} --project-context-id ${dnanexus_workspace}) - - if [ ${status} == "" ]; then curl --request GET https://img.shields.io/badge/Envronment%3A%20DNAnexus-run%20succesful-success?style=flat > ./badges/env/dnanexus.svg; else curl --request GET https://img.shields.io/badge/Envronment%3A%20DNAnexus-run%20failed-critical?style=flat > ./badges/env/dnanexus.svg; fi + - > + if [ "${status}" == "" ]; then + curl --request GET https://img.shields.io/badge/Envronment%3A%20DNAnexus-run%20succesful-success?style=flat > ./badges/env/dnanexus.svg + else + curl --request GET https://img.shields.io/badge/Envronment%3A%20DNAnexus-run%20failed-critical?style=flat > ./badges/env/dnanexus.svg + fi after_script: - module load dxtoolkit/python27/0.294.0 - dx rm /ci-env/auth/* --all --auth-token ${dnanexus_authToken} --project-context-id ${dnanexus_workspace}