From 61468bd944707ff1f4a0032c16b74c18da36e061 Mon Sep 17 00:00:00 2001
From: Venkat Malladi <venkat.malladi@utsouthwestern.edu>
Date: Mon, 9 Nov 2020 21:38:06 -0600
Subject: [PATCH] Fix regex.
---
workflow/scripts/generate_versions.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflow/scripts/generate_versions.py b/workflow/scripts/generate_versions.py
index 3fb244f..e5f90e0 100644
--- a/workflow/scripts/generate_versions.py
+++ b/workflow/scripts/generate_versions.py
@@ -36,7 +36,7 @@ SOFTWARE_REGEX = {
'BDBag': ['version_bdbag.txt', r"BDBag (\S+) \(Bagit \S+\)"],
'RSeQC': ['version_rseqc.txt', r"infer_experiment.py (\S+)"],
'Trim Galore!': ['version_trimgalore.txt', r"version (\S+)"],
- 'HISAT2': ['version_hisat.txt', r".* version (\S+)"],
+ 'HISAT2': ['version_hisat2.txt', r"version (\S+)"],
'Samtools': ['version_samtools.txt', r"samtools (\S+)"],
'picard (MarkDuplicates)': ['version_markdups.txt', r"Version: (\S+)"],
'featureCounts': ['version_featurecounts.txt', r"featureCounts v(\S+)"],
--
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