From 60d3fa8b9177613db3986cff2476f7761f97e9b2 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Mon, 28 Dec 2020 18:49:48 -0600
Subject: [PATCH] Fix python container in ci
---
.gitlab-ci.yml | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index ac26333..5099028 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -67,7 +67,7 @@ parseMetadata:
except:
- merge_requests
script:
- - singularity run 'docker://gudmaprbk/python3::1.0.0' python3 --version > version_python.txt
+ - singularity run 'docker://gudmaprbk/python3:1.0.0' python3 --version > version_python.txt
- rep=$(singularity run 'docker://gudmaprbk/python3:1.0.0' python3 ./workflow/scripts/parseMeta.py -r Replicate_RID -m "./test_data/meta/metaTest.csv" -p repRID)
- exp=$(singularity run 'docker://gudmaprbk/python3:' python3 ./workflow/scripts/parseMeta.py -r Replicate_RID -m "./test_data/meta/metaTest.csv" -p expRID)
- study=$(singularity run 'docker://gudmaprbk/python3:1.0.0' python3 ./workflow/scripts/parseMeta.py -r Replicate_RID -m "./test_data/meta/metaTest.csv" -p studyRID)
--
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