From 56f975993bc1265215fbda9dbd20ee2e1179b9f3 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Sun, 21 Mar 2021 12:52:39 -0500
Subject: [PATCH] Split aws exports
---
.gitlab-ci.yml | 14 ++++++--------
1 file changed, 6 insertions(+), 8 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 722e9c0..3aa9852 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -1096,10 +1096,9 @@ aws:
- mkdir -p ./badges/env
- curl --request GET https://img.shields.io/badge/Envronment%3A%20AWS-inactive-critical?style=flat > ./badges/env/aws.svg
- module load awscli/1.11.139
- - >
- export AWS_ACCESS_KEY_ID=${aws_accesskeyid} &&\
- export AWS_SECRET_ACCESS_KEY=${aws_secretaccesskey} &&\
- aws configure set region ${aws_region}
+ - export AWS_ACCESS_KEY_ID=${aws_accesskeyid}
+ - export AWS_SECRET_ACCESS_KEY=${aws_secretaccesskey}
+ - aws configure set region ${aws_region}
- aws s3 cp ./test_data/auth/ s3://bicf-output/ci-env/auth/ --exclude "*" --include "c*" --recursive
- aws s3 cp ./test_data/fastq/xsmall/ s3://bicf-output/ci-env/input/ --exclude "*" --include "Q-Y5F6_10K.R*.fastq.gz" --recursive
- >
@@ -1124,10 +1123,9 @@ aws:
fi
after_script:
- module load awscli/1.11.139
- - >
- export AWS_ACCESS_KEY_ID=${aws_accesskeyid}
- export AWS_SECRET_ACCESS_KEY=${aws_secretaccesskey}
- aws configure set region ${aws_region}
+ - export AWS_ACCESS_KEY_ID=${aws_accesskeyid}
+ - export AWS_SECRET_ACCESS_KEY=${aws_secretaccesskey}
+ - aws configure set region ${aws_region}
- aws s3 rm s3://bicf-output/ci-env/auth/ --recursive
- aws s3 rm s3://bicf-output/ci-env/input/ --recursive
artifacts:
--
GitLab