diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index c2b63ce58bde32bc80c7bfbd5ee2792bad99fdb4..b7a7ac50de3e4ccafdda7bbdd463421e9b7ce2dc 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -389,7 +389,7 @@ uploadQC: done echo all old mRNA QC RIDs deleted fi - rid=$(singularity run 'docker://gudmaprbk/deriva1.4:1.0.0' python3 ./workflow/scripts/upload_qc.py -r 17-BTFJ -e 17-BVDJ -p "Single Read" -s forward -l 35 -w 5 -f 1 -t 1 -n "This is a test mRNA QC" -o staging.gudmap.org -c ${cookie} -u F) + rid=$(singularity run 'docker://gudmaprbk/deriva1.4:1.0.0' python3 ./workflow/scripts/upload_qc.py -r 17-BTFJ -e 17-BVDJ -p "Single End" -s forward -l 35 -w 5 -f 1 -t 1 -n "This is a test mRNA QC" -o staging.gudmap.org -c ${cookie} -u F) echo ${rid} test mRNA QC created uploadProcessedFile: