From 4d88c335430af74474832c30fe3f8a90feafce7d Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Sat, 18 Jan 2020 16:19:54 -0600
Subject: [PATCH] Fix second trimData unit test
---
workflow/tests/test_trimData.py | 1 +
1 file changed, 1 insertion(+)
diff --git a/workflow/tests/test_trimData.py b/workflow/tests/test_trimData.py
index d766854..6538a00 100644
--- a/workflow/tests/test_trimData.py
+++ b/workflow/tests/test_trimData.py
@@ -12,6 +12,7 @@ test_output_path = os.path.dirname(os.path.abspath(__file__)) + \
def test_trimData_se():
assert os.path.exists(os.path.join(test_output_path, '16-1ZX4_trimmed.fq.gz'))
+@pytest.mark.trimData
def test_trimData_pe():
assert os.path.exists(os.path.join(test_output_path, 'Q-Y5JA_R1_val_1.fq.gz'))
assert os.path.exists(os.path.join(test_output_path, 'Q-Y5JA_R2_val_2.fq.gz'))
\ No newline at end of file
--
GitLab