From 49771d516012d26f7f96b261ef68f6c941097280 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Tue, 2 Mar 2021 19:55:29 -0600
Subject: [PATCH] Fix ci lint
---
.gitlab-ci.yml | 9 +++++----
1 file changed, 5 insertions(+), 4 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 8456439..9c3fac7 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -27,16 +27,17 @@ stages:
- consistency
-cache:
+img_cache:
stage: singularity
script:
- >
- for container in `cat nextflow.config | grep -oP "container = \K.*" | tr -d "'" | sort | uniq`; do
- singularity pull 'docker://'${container}
- done
+ for container in `cat nextflow.config | grep -oP "container = \K.*" | tr -d "'" | sort | uniq`; do
+ singularity pull 'docker://'${container}
+ done
versions:
stage: singularity
+ script:
- singularity run 'docker://gudmaprbk/deriva1.4:1.0.0' deriva-download-cli --version > version_deriva.txt
- singularity run 'docker://gudmaprbk/deriva1.4:1.0.0' bdbag --version > version_bdbag.txt
- singularity run 'docker://gudmaprbk/python3:1.0.0' python3 --version > version_python.txt
--
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