From 42a16c695628d58ee49ce7fc1957bddd6920f713 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Fri, 14 Feb 2020 13:23:11 -0600
Subject: [PATCH] Fix if not exist in bdbagFetch.sh
---
workflow/scripts/bdbagFetch.sh | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflow/scripts/bdbagFetch.sh b/workflow/scripts/bdbagFetch.sh
index 15bc977..08ffcf1 100644
--- a/workflow/scripts/bdbagFetch.sh
+++ b/workflow/scripts/bdbagFetch.sh
@@ -1,6 +1,6 @@
#!/bin/bash
-if [ ! -z ${3}} ]
+if [ -z ${3}} ]
then
bdbag --resolve-fetch all --fetch-filter filename\$*fastq.gz ${1}
for i in $(find */ -name "*.R*.fastq.gz")
--
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