diff --git a/workflow/scripts/parse_meta.py b/workflow/scripts/parse_meta.py index aa7114d8529de158d9e8ead99551bf584c8019c1..fdbc86c12a2fb6832217ec0f08263d0102c9e566 100644 --- a/workflow/scripts/parse_meta.py +++ b/workflow/scripts/parse_meta.py @@ -78,7 +78,7 @@ def main(): elif (metaFile.Used_Spike_Ins.unique() == "no"): spike = "no" else: - stranded = metaFile.Used_Spike_Ins.unique()[0] + spike = metaFile.Used_Spike_Ins.unique()[0] print(spike) # Get species metadata from 'Experiment.csv' @@ -88,7 +88,7 @@ def main(): elif (metaFile.Species.unique() == "Homo sapiens"): species = "Homo sapiens" else: - stranded = metaFile.Species.unique()[0] + species = metaFile.Species.unique()[0] print(species) # Get read length metadata from 'Experiment Settings.csv'