diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index 2bf89a8d5c454ed72f2df64c24caa314afc74122..582177f734dd0d8d3123f93d5718d7e75437c97d 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -382,7 +382,7 @@ uploadOutputBag: cookie=$(cat credential.json | grep -A 1 '\"dev.gudmap.org\": {' | grep -o '\"cookie\": \".*\"') && cookie=${cookie:11:-1} && loc=$(singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' deriva-hatrac-cli --host dev.gudmap.org put ./test.txt /hatrac/resources/rnaseq/pipeline/output_bag/TEST/test.txt) && - rid=$(singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' python3 ./workflow/scripts/uploadOutputBag.py -e -f test.txt -l ${loc} -s ${md5} -b ${size} -n 'This is a test output bag' -o dev.gudmap.org -c ${cookie}) && + rid=$(singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' python3 ./workflow/scripts/uploadOutputBag.py -e 18-MJ3C -f test.txt -l ${loc} -s ${md5} -b ${size} -n 'This is a test output bag' -o dev.gudmap.org -c ${cookie}) && echo ${rid} test output bag created else rid=$(echo ${exist} | grep -o '\"RID\":\".*\",\"RCT') &&