diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index 3491d360a870c1a31511d6d856c3a8e7684e8cb3..396e683c779f54ea871605a7f93a6b6b0d1972a6 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -10,6 +10,7 @@ before_script: stages: - unit - integration + - consistency getBag: stage: unit @@ -132,6 +133,16 @@ integration_se: - hostname - ulimit -a - nextflow -bg run ./workflow/rna-seq.nf --deriva ./test_data/auth/credential.json --bdbag ./test_data/auth/cookies.txt --repRID 16-1ZX4 --ci true + artifacts: + name: "$CI_JOB_NAME" + when: always + paths: + - dag.png + - output/qc/ + expire_in: 7 days + cache: + paths: + - output/qc/ integration_pe: stage: integration @@ -144,4 +155,8 @@ integration_pe: when: always paths: - dag.png + - output/qc/ expire_in: 7 days + cache: + paths: + - output/qc/