diff --git a/rna-seq.nf b/rna-seq.nf index 65b4565b05e34f4d720632b597e29b5c15bf8924..763581ac156e5139f51d027792489087bd8df954 100644 --- a/rna-seq.nf +++ b/rna-seq.nf @@ -258,7 +258,7 @@ process getData { # link deriva cookie for authentication echo -e "LOG: linking deriva cookie" >> ${repRID}.getData.log mkdir -p ~/.bdbag - ln -sf `readlink -e cookies.txt` ~/.bdbag/deriva-cookies.txt + cp `readlink -e cookies.txt` ~/.bdbag/deriva-cookies.txt echo -e "LOG: linked" >> ${repRID}.getData.log # get bag basename