diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf index ec05f53cb2ddb06bd70a742b0fcd7b83dcb5372d..92d97b051d8cc66016517f4d410d141a74ee4b4a 100644 --- a/workflow/rna-seq.nf +++ b/workflow/rna-seq.nf @@ -350,7 +350,7 @@ process dedupData { output: tuple val ("${repRID}"), path ("${repRID}.sorted.deduped.bam"), path ("${repRID}.sorted.deduped.bam.bai") into dedupBam - path ("*.deduped.Metrics.txt") into alignQC + path ("*.deduped.Metrics.txt") into dedupQC path ("${repRID}.dedup.out") path ("${repRID}.dedup.err")