From 2c70b0fc36b628a4506201dfbf3f552a25aa8e28 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Tue, 2 Mar 2021 13:43:04 -0600
Subject: [PATCH] Fix extra tab in seqwho multiqc tsv
---
rna-seq.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/rna-seq.nf b/rna-seq.nf
index 63133f4..d554449 100644
--- a/rna-seq.nf
+++ b/rna-seq.nf
@@ -926,7 +926,7 @@ process seqwho {
echo -e "Read 1\t\${seqtypeR1}\t\${speciesR1}\t\${seqtypeConfidenceR1}\t\${consensus}\t\${speciesConfidenceR1}" >> seqwhoInfer.tsv
if [ "${ends}" == "pe" ]
then
- echo -e "Read 2\t\${seqtypeR2}\t\${speciesR2}\t\t\${seqtypeConfidenceR2}\t\${consensus}\t\${speciesConfidenceR2}" >> seqwhoInfer.tsv
+ echo -e "Read 2\t\${seqtypeR2}\t\${speciesR2}\t\${seqtypeConfidenceR2}\t\${consensus}\t\${speciesConfidenceR2}" >> seqwhoInfer.tsv
fi
--
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