From 27f3b44f8772a5273180c1a5bcccf4ad2fb5d041 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Tue, 2 Mar 2021 21:23:21 -0600
Subject: [PATCH] Temp echo sif
---
.gitlab-ci.yml | 1 +
version_deriva.txt | 0
2 files changed, 1 insertion(+)
create mode 100644 version_deriva.txt
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index e8e384f..ccf8c3a 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -41,6 +41,7 @@ collect:
- >
derivaImg=$(cat nextflow.config | grep -oP "container = \K.*" | tr -d "'" | sort | uniq | grep deriva | cut -d"/" -f2 | cut -d":" -f1)
derivaVar=$(cat nextflow.config | grep -oP "container = \K.*" | tr -d "'" | sort | uniq | grep deriva | cut -d"/" -f2 | cut -d":" -f2)
+ echo ${dir}${derivaImg}-${derivaVar}.sif
singularity run ${dir}${derivaImg}-${derivaVar}.sif deriva-download-cli --version > version_deriva.txt
singularity run ${dir}${derivaImg}-${derivaVar}.sif bdbag --version > version_bdbag.txt
- >
diff --git a/version_deriva.txt b/version_deriva.txt
new file mode 100644
index 0000000..e69de29
--
GitLab