From 25a587027375fbf0cfb501b89ea1384dca2eaa21 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Tue, 2 Mar 2021 14:37:17 -0600
Subject: [PATCH] Fix tabing in multiqc config
---
rna-seq.nf | 1 -
workflow/conf/multiqc_config.yaml | 2 +-
2 files changed, 1 insertion(+), 2 deletions(-)
diff --git a/rna-seq.nf b/rna-seq.nf
index d554449..932302f 100644
--- a/rna-seq.nf
+++ b/rna-seq.nf
@@ -929,7 +929,6 @@ process seqwho {
echo -e "Read 2\t\${seqtypeR2}\t\${speciesR2}\t\${seqtypeConfidenceR2}\t\${consensus}\t\${speciesConfidenceR2}" >> seqwhoInfer.tsv
fi
-
# save species file
echo "\${speciesInfer}" > inferSpecies.csv
diff --git a/workflow/conf/multiqc_config.yaml b/workflow/conf/multiqc_config.yaml
index ae9e195..0e6d8d5 100644
--- a/workflow/conf/multiqc_config.yaml
+++ b/workflow/conf/multiqc_config.yaml
@@ -201,4 +201,4 @@ sp:
tin:
fn: '*_tin.hist.tsv'
seqwho:
- fn: 'seqwhoInfer.tsv'
+ fn: 'seqwhoInfer.tsv'
--
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