From 22e2cb0481d114c5607fb3451b17a2e4058022a5 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Thu, 7 Jan 2021 15:36:36 -0600
Subject: [PATCH] Fix extra quote in getData
---
workflow/rna-seq.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf
index 378fc81..487957e 100644
--- a/workflow/rna-seq.nf
+++ b/workflow/rna-seq.nf
@@ -253,7 +253,7 @@ process getData {
echo -e "LOG: fetched" >> ${repRID}.getData.log
fastqCount=\$(ls *.fastq.gz | wc -l)
- echo "\${fastqCount}"" > fastqCount.csv
+ echo "\${fastqCount}" > fastqCount.csv
"""
}
--
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