From 1e222b0d6aa3615cfd72aeb034f728883ca91ca4 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Mon, 4 Jan 2021 21:14:03 -0600
Subject: [PATCH] Fix bad variable in parse
---
workflow/rna-seq.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf
index b803670..54874a6 100644
--- a/workflow/rna-seq.nf
+++ b/workflow/rna-seq.nf
@@ -368,7 +368,7 @@ process parseMetadata {
fi
# save design file
- echo -e "\${endsMeta},\${endsRaw},\${endsManual},\${stranded},\${strandedRaw},\${spike},\${species},\${readLength},\${exp},\${study}" > design.csv
+ echo -e "\${endsMeta},\${endsRaw},\${endsManual},\${stranded},\${spike},\${species},\${readLength},\${exp},\${study}" > design.csv
# save fastq count error file
echo -e "\${fastqCountError},\${fastqCountError_details}" > fastqCountError.csv
--
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