From 1acd021b9624598f43b02c4701cedddd151ae140 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Mon, 30 Nov 2020 17:08:09 -0600
Subject: [PATCH] Finalize CI unit uploadInputBag
---
.gitlab-ci.yml | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 23f6775..02e2121 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -308,8 +308,8 @@ uploadInputBag:
rid=singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' python3 ./workflow/scripts/uploadInputBag.py -f test.txt -l ${loc} -s ${md5} -b ${size} -o dev.gudmap.org -c ${cookie} &&
echo ${rid} test input bag created
else
- rid=\$(echo \${exist} | grep -o '\\"RID\\":\\".*\\",\\"RCT') &&
- rid=\${rid:8:-6} &&
+ rid=$(echo ${exist} | grep -o '\"RID\":\".*\",\"RCT') &&
+ rid=${rid:8:-6} &&
echo ${rid} test input bag already exists
fi
--
GitLab