diff --git a/workflow/tests/test_getData.py b/workflow/tests/test_getData.py new file mode 100644 index 0000000000000000000000000000000000000000..c99fc4ec2006fb50e71fefe62abf3d7d92f3d733 --- /dev/null +++ b/workflow/tests/test_getData.py @@ -0,0 +1,14 @@ +#!/usr/bin/env python3 + +import pytest +import pandas as pd +from io import StringIO +import os + +test_output_path = os.path.dirname(os.path.abspath(__file__)) + \ + '/../../Replicate_16-1ZX4/' + +@pytest.mark.getData +def test_getData(): + assert os.path.exists(os.path.join(test_output_path, 'bagit.txt')) + assert os.path.exists(os.path.join(test_output_path, 'data/assets/Study/16-1ZWP/Experiment/16-1ZWR/Replicate/16-1ZX4/3_1_single.R1.fastq.gz')) \ No newline at end of file