From 179ed6f21c5524f026845f8d0bd6b6f2235b856f Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Mon, 4 Jan 2021 19:07:01 -0600
Subject: [PATCH] Fix elif then in fail
---
workflow/rna-seq.nf | 1 +
1 file changed, 1 insertion(+)
diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf
index 2f52e12..2b621ee 100644
--- a/workflow/rna-seq.nf
+++ b/workflow/rna-seq.nf
@@ -1997,6 +1997,7 @@ process failExecutionRun {
then
endInfer="Single End"
elif [ "${endsInfer}" == "pe" ]
+ then
endInfer="Paired End"
else
endInfer="unknown"
--
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