From 1383fb10bbcbc363550b169ecf4b01ad3730ced4 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Tue, 2 Mar 2021 18:04:43 -0600
Subject: [PATCH] Add singularity cache to start before script

---
 .gitlab-ci.yml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 8a0c1c3..62d1eb0 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -2,6 +2,7 @@ before_script:
   - module load python/3.6.4-anaconda
   - pip install --user attrs==20.3.0 pytest==6.2.2 pytest-pythonpath==0.7.3 pytest-cov==2.11.1
   - module load singularity/3.5.3
+  - export SINGULARITY_CACHEDIR=/project/BICF/BICF_Core/shared/gudmap/singularity_cache/
   - module load nextflow/20.01.0
   - ln -sfn /project/BICF/BICF_Core/shared/gudmap/test_data/* ./test_data/
   - mkdir -p ~/.deriva
-- 
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