From 0ecf1945a87c236f9ebd42c57248b57935cf98ff Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Sat, 18 Jan 2020 15:40:17 -0600
Subject: [PATCH] Remove executor settings in .nf
---
workflow/rna-seq.nf | 2 --
1 file changed, 2 deletions(-)
diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf
index bbb5a76..ab53a41 100755
--- a/workflow/rna-seq.nf
+++ b/workflow/rna-seq.nf
@@ -27,7 +27,6 @@ derivaConfig = Channel.fromPath("${baseDir}/conf/replicate_export_config.json")
* getData: get bagit file from consortium
*/
process getBag {
- executor 'local'
tag "${repRID}"
publishDir "${logsDir}", mode: 'copy', pattern: "${repRID}.getBag.err"
@@ -58,7 +57,6 @@ process getData {
publishDir "${logsDir}", mode: 'copy', pattern: "${repRID}.getData.err"
input:
- executor 'local'
path cookies, stageAs: 'deriva-cookies.txt' from bdbag
path bagit
--
GitLab