From 0e90f16f0cc7a76448d8721279ffd122c0932f72 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Mon, 30 Nov 2020 17:06:39 -0600
Subject: [PATCH] Finalize CI unit uploadInputBag
---
.gitlab-ci.yml | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index a5c5c81..23f6775 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -300,7 +300,7 @@ uploadInputBag:
- >
md5=$(md5sum ./test.txt | awk '{ print $1 }') &&
size=$(wc -c < ./test.txt) &&
- exist=$(singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' curl -s https://dev.gudmap.org/ermrest/catalog/2/entity/RNASeq:Input_Bag/File_MD5=${md5})
+ exist=$(singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' curl -s https://dev.gudmap.org/ermrest/catalog/2/entity/RNASeq:Input_Bag/File_MD5=${md5}) &&
if [ "${exist}" == "[]" ]; then
cookie=$(cat credential.json | grep -A 1 '\"dev.gudmap.org\": {' | grep -o '\"cookie\": \".*\"') &&
cookie=${cookie:11:-1} &&
--
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