From 0dbc77e0975e6789f11a2d9cbad81ecf58b3fa45 Mon Sep 17 00:00:00 2001 From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu> Date: Thu, 23 Jul 2020 12:50:32 -0500 Subject: [PATCH] Update README.md --- README.md | 7 ++++++- 1 file changed, 6 insertions(+), 1 deletion(-) diff --git a/README.md b/README.md index 89c1c3c..bc12d2c 100644 --- a/README.md +++ b/README.md @@ -37,7 +37,12 @@ To Run: * `--refMoVersion` mouse reference version ***(optional)*** * `--refHuVersion` human reference version ***(optional)*** * `--refERCCVersion` human reference version ***(optional)*** - * `-profile` config profile to use: standard = processes on BioHPC cluster, aws_ondemand = AWS Batch on-demand instant requests, aws_spot = AWS Batch spot instance requests ***(optional)*** + * `-profile` config profile to use ***(optional)***: + * defaut = processes on BioHPC cluster + * **biohpc** = process on BioHPC cluster + * **biohpc_max** = process on high power BioHPC cluster nodes (=> 128GB nodes), for resource testing + * **aws_ondemand** = AWS Batch on-demand instant requests + * **aws_spot** = AWS Batch spot instance requests * NOTES: * once deriva-auth is run and authenticated, the two files above are saved in ```~/.deriva/``` (see official documents from [deriva](https://github.com/informatics-isi-edu/deriva-client#installer-packages-for-windows-and-macosx) on the lifetime of the credentials) * reference version consists of Genome Reference Consortium version, patch release and GENCODE annotation release # (leaving the params blank will use the default version tied to the pipeline version) -- GitLab