From 0bdfdeef63a53fadb10712e1fe1c7e597cd5d42c Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Wed, 12 Aug 2020 15:08:47 -0500
Subject: [PATCH] Ouput inputBag
---
workflow/rna-seq.nf | 1 +
1 file changed, 1 insertion(+)
diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf
index 772d076..5b03e5a 100644
--- a/workflow/rna-seq.nf
+++ b/workflow/rna-seq.nf
@@ -110,6 +110,7 @@ Development : ${params.dev}
*/
process getBag {
tag "${repRID}"
+ publishDir "${outDir}/inputBag", mode: 'copy', pattern: "Replicate_*.zip"
input:
path credential, stageAs: "credential.json" from deriva
--
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