diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf
index 772d076174400bca13110869a797f87617ff5c89..5b03e5a2efa11cc13e2e342c646ce0d03add9068 100644
--- a/workflow/rna-seq.nf
+++ b/workflow/rna-seq.nf
@@ -110,6 +110,7 @@ Development            : ${params.dev}
  */
 process getBag {
   tag "${repRID}"
+  publishDir "${outDir}/inputBag", mode: 'copy', pattern: "Replicate_*.zip"
 
   input:
     path credential, stageAs: "credential.json" from deriva