diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf index ad2a7ba494d536a32f872930c59950804e42aa7c..d79e7ccc5d27ade8bfc3bbc3f2067f6e8edf1974 100644 --- a/workflow/rna-seq.nf +++ b/workflow/rna-seq.nf @@ -373,7 +373,7 @@ process parseMetadata { if [ "${strandedForce}" != "" ] then stranded=${strandedForce} - echo -e "LOG: spike-in metadata forced: \${spike}" >> ${repRID}.parseMetadata.log + echo -e "LOG: spike-in metadata forced: \${stranded}" >> ${repRID}.parseMetadata.log fi # get spike-in metadata