diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml index 7f07bf2c9d00d3698828f7ba5551d733f2aecae4..695f595ca617347080add1dabdfc425af792fd7b 100644 --- a/.gitlab-ci.yml +++ b/.gitlab-ci.yml @@ -288,7 +288,7 @@ uploadInputBag: script: - ln -sfn `readlink -e ./test_data/auth/credential.json` ./credential.json - > - hatrac=$(singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' deriva-hatrac-cli --host dev.gudmap.org ls /hatrac/resources/rnaseq/pipeline/input_bag/ | grep -o '/TEST$'') + hatrac=$(singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' deriva-hatrac-cli --host dev.gudmap.org ls /hatrac/resources/rnaseq/pipeline/input_bag/ | grep -o '/TEST$') echo && if [ -z "${hatrac}" ]; then singularity run 'docker://gudmaprbk/deriva1.3:1.0.0' deriva-hatrac-cli --host dev.gudmap.org mkdir /hatrac/resources/rnaseq/pipeline/input_bag/TEST &&