diff --git a/workflow/scripts/tinHist.py b/workflow/scripts/tinHist.py index 6cff3b9abbcec4bdb91edacfc4c12842453f19e5..e97b120336818ece4fa90ac149091e399ab4c058 100644 --- a/workflow/scripts/tinHist.py +++ b/workflow/scripts/tinHist.py @@ -35,7 +35,9 @@ def main(): hist = hist.T.fillna(0.0).astype(int) #hist = hist.apply(lambda x: x/x.sum()*100, axis=1) hist.to_csv(args.repRID + '.tin.hist.tsv',sep='\t') - tin['TIN'][(tin['TIN']!=0)].median().to_csv(args.repRID + '.tin.med.csv',sep=',') + medFile = open(args.repRID + '.tin.med.csv',"w") + medFile.write(str(round(tin['TIN'][(tin['TIN']!=0)].median()))) + medFile.close() if __name__ == '__main__': - main() \ No newline at end of file + main()