From 03f13a82dba5af75295e15ced6d65f954cbbfa89 Mon Sep 17 00:00:00 2001
From: "Gervaise H. Henry" <gervaise.henry@utsouthwestern.edu>
Date: Mon, 25 Jan 2021 12:53:34 -0600
Subject: [PATCH] Remove unnecessary RID output parsing
---
workflow/rna-seq.nf | 8 +-------
1 file changed, 1 insertion(+), 7 deletions(-)
diff --git a/workflow/rna-seq.nf b/workflow/rna-seq.nf
index 57ec3ac..cc02c36 100644
--- a/workflow/rna-seq.nf
+++ b/workflow/rna-seq.nf
@@ -2069,14 +2069,8 @@ process uploadQC {
"""
}
-// Extract mRNA qc RID into channel
-qcRID = Channel.create()
-qcRID_fl.splitCsv(sep: ",", header: false).separate(
- qcRID
-)
-
/*
- *ouputBag: create ouputBag
+ *uploadProcessedFile: uploads the processed files
*/
process uploadProcessedFile {
tag "${repRID}"
--
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