diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index b69d702f4f9ce3deeddf173f25ae775b3f5450bb..1181343f1bb3f9085eacb57fabe343921489bf98 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -11,6 +11,6 @@ stages:
 unit:
   stage: unit
   script:
-  - singularity run 'docker://bicf/bdbag:1.0' bdbag --materialize ./test_data/File_Q-Y53P.zip
-  - singularity run 'docker://bicf/bdbag:1.0' bdbag --validate full ./test_data/File_Q-Y53P/
+  - singularity run 'docker://bicf/gudmaprbkfilexfer:1.1' bdbag --materialize ./test_data/File_Q-Y53P.zip
+  - singularity run 'docker://bicf/gudmaprbkfilexfer:1.1' bdbag --validate full ./test_data/File_Q-Y53P/
   - if [[ $(md5sum test_data/File_Q-Y53P/data/assets/Study/Q-Y4H0/Experiment/Q-Y4BY/Replicate/Q-Y5F8/hMARIS_SIX2+_RiboDep#1.gene.rpkm.txt | awk '{ print $1 }') != $(cat test_data/File_Q-Y53P/data/File.csv | cut -d ',' -f10 | tail -1) ]]; then exit 21; fi;
diff --git a/workflow/conf/biohpc.config b/workflow/conf/biohpc.config
index 2e90c4f157e816cfccb05ec5eb68b4417c651fd0..13368ad2ec3ba4a6696dac0731de81f00bb3c479 100755
--- a/workflow/conf/biohpc.config
+++ b/workflow/conf/biohpc.config
@@ -5,13 +5,13 @@ process {
 
   // Process specific configuration
   withName:splitData {
-    container = 'docker://bicf/gudmaprbkfilexfer:1.0'
+    container = 'docker://bicf/gudmaprbkfilexfer:1.1'
   }
   withName:getData {
-    container = 'docker://bicf/gudmaprbkfilexfer:1.0'
+    container = 'docker://bicf/gudmaprbkfilexfer:1.1'
   }
   withName:trimData {
-    container = 'docker://bicf/trimgalore:1.0'
+    container = 'docker://bicf/trimgalore:1.1'
     queue = '256GB,256GBv1,384GB'
   }
 }
diff --git a/workflow/conf/conda.env.bdbag.yml b/workflow/conf/conda.env.bdbag.yml
deleted file mode 100644
index 33361d301b3fac561fa39807e3c740583e57d28b..0000000000000000000000000000000000000000
--- a/workflow/conf/conda.env.bdbag.yml
+++ /dev/null
@@ -1,5 +0,0 @@
-name: bdbag
-dependencies:
-  - pandas=0.23.3=py36_0
-  - pip:
-    - bdbag==1.5.5